Hare Krishna, please accept my humble obeisances.
First, let's see how authentic is the verse you quoted. This quote is found in the composition named Bhāgavata-tātparya-nirṇaya authored by Śrī Madhvācārya. In that composition, he attributes this quote to the Garuḍa-purāṇa. The complete verse is also quoted by Srila Krishnadas Kaviraj Goswami in Caitanya-caritāmṛta Madhya 25.143.
An edition of the Bhāgavata-tātparya-nirṇaya published by the Uttarādi-maṭha can be downloaded from: https://archive.org/details/bhagavatatatparya
The quote is located on the second page of the PDF. The quotation's authenticity is beyond question. (Based on Harishad Prabhus research.)
Now coming to the main question, the source of the quotation is Garuda Purana. Garuda Purana 3.1.50-68 Sings the glories of Srimad Bhagavatam, it clearly says it's in the satvika purana's list, devoted to Vishnu, and any other conclusion apart from Vishnu's supremacy in other non Satvika Puranas should be rejected. It in the same range of quotations mentioned above, Garuda Purana mentions Devi Bhagavata in the list of an Upa-Purana and Tamas- Rajas inherited scripture.
Thus we understand, even if any other scripture or work (Devi Bhagavata is famous for it) claims to fit in the description of Bhagavatam's glories by replacing it with the original Bhagavatam, it doesn't matter because Garuda Purana the very source of the quotation nowhere leaves any doubt that it supports and hints to Krishna's Bhagavatam alone.
And as far we know there's no other commentary of Vyasdev on the Vedanta Sutra.
Hare Krishna, Your aspiring Servant.